进入ENA Browser,搜索对应的GSE号,进入study项目,选择TSV格式的Download report。

从TSV表格中提取下载链接,一行一个写入url.txt,前面加上ftp://
,接着使用wget -c -i url.txt
下载
ls *.fastq.gz|cut -d '_' -f 1|while read i ;do (echo ${i}_1*.gz' will be moved to '${i}_S1_L001_R1_001.fastq.gz);done
ls *.fastq.gz|cut -d '_' -f 1|while read i ;do (echo ${i}_2*.gz' will be moved to '${i}_S1_L001_R2_001.fastq.gz);done
ls *.fastq.gz|cut -d '_' -f 1|while read i ;do (mv ${i}_1*.gz ${i}_S1_L001_R1_001.fastq.gz;mv ${i}_2*.gz ${i}_S1_L001_R2_001.fastq.gz);done
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